BIT half-semester Nanopore sequencing module. by Carlos Goller https://padlet.com/ccgoller/bitnanopore Please share ideas for the design of the Spring 2024 BIT half-semester lab module focused on Nanopore sequencing. en-us 2023-08-12 19:05:24 UTC 2023-08-14 18:32:05 UTC hello@padlet.com https://padlet.net/icons/png/1f9ec.png Which workflows should we do? ccgoller https://padlet.com/ccgoller/bitnanopore/wish/2660702158 2023-08-12 19:16:29 UTC https://padlet.com/ccgoller/bitnanopore/wish/2660702158 Is long-read transcriptomics feasible and necessary for this course? ccgoller https://padlet.com/ccgoller/bitnanopore/wish/2660702892 2023-08-12 19:21:58 UTC https://padlet.com/ccgoller/bitnanopore/wish/2660702892 Which approaches/activities should be included? ccgoller https://padlet.com/ccgoller/bitnanopore/wish/2660704978 2023-08-12 19:34:09 UTC https://padlet.com/ccgoller/bitnanopore/wish/2660704978 Basecalling ccgoller https://padlet.com/ccgoller/bitnanopore/wish/2661615354 Basecalling: what it is, different models, advantages/disadvantages... ]]> 2023-08-14 15:58:27 UTC https://padlet.com/ccgoller/bitnanopore/wish/2661615354 Kit Selection ccgoller https://padlet.com/ccgoller/bitnanopore/wish/2661719065 What kits are available? What are the advantages and disadvantages?]]> 2023-08-14 18:30:09 UTC https://padlet.com/ccgoller/bitnanopore/wish/2661719065 Data Management ccgoller https://padlet.com/ccgoller/bitnanopore/wish/2661719906 FASTQ, POD5... BAM... how to organize output and manage raw data. README file format. ]]> 2023-08-14 18:31:30 UTC https://padlet.com/ccgoller/bitnanopore/wish/2661719906 EPI2ME and EPI2ME Labs ccgoller https://padlet.com/ccgoller/bitnanopore/wish/2661720286 EPI2ME and EPI2ME Labs workflows]]> 2023-08-14 18:32:05 UTC https://padlet.com/ccgoller/bitnanopore/wish/2661720286