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Subject: RNA and protein from Pyrococcus furiosus

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Subject: RNA and protein from Pyrococcus furiosus

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https://www.rcsb.org/3d-view/ngl/6TPH

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Structure Summary

3D View

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Genome

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FASTA Sequence

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PDB Format (Header)

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mmCIF Format (Header)

FASTA Sequence

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PDBx/mmCIF Format (gz)

PDBML/XML Format (gz)

Validation Full PDF

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Validation CIF

Biological Assembly 1 (CIF - gz)

Biological Assembly 1 (PDB - gz)

SOLUTION NMR STRUCTURE OF THE GAGA FACTOR/DNA COMPLEX, 50 STRUCTURES

Note: Use your mouse to drag, rotate, and zoom in and out of the structure. Mouse-over to identify atoms and bonds. Mouse controls documentation.

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Citation

Cite images created with the PDB ID and associated publication, NGL Viewer (AS Rose et al. (2018) NGL viewer: web-based molecular graphics for large complexes. Bioinformatics doi:10.1093/bioinformatics/bty419), and RCSB PDB.

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Use the menu on the right to choose different colors, styles, and models

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Use the menu on the right to choose different colors, styles, and models

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When you want to save a picture, click the Screenshot button on the bottom menu. Upload your pictures to this Padlet!

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When you want to save a picture, click the Screenshot button on the bottom menu. Upload your pictures to this Padlet!

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N-terminus: the starting end of a protein

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To be hydrophobic means to not mix well with water. (Oil and water don't mix; oil is very hydrophobic.)

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H - hydrogen
C - carbon
N - nitrogen
O - oxygen
F - fluorine
P - phosphorus
S - sulfur

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Shows the individual amino acids (in a protein) and/or nucleic acids (in DNA or RNA).

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Turns the protein chunk lavender and the DNA or RNA chunk orange.

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Very cool to mess around with, I selected this because I like all of the individual spheres of different color.