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The poison bottles work as the Golgi because that's what the poison(Protein) is packaged in.

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The office is like the nucleus because the DNA(poison recipe) is stored in Kylah's office.

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The walls because it protects the factory's interior.

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It's Lysosomes because it disposes waste like garbage.

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Air is like the Cytoplasm because it's everywhere in the factory.

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The doors are like the Cell membrane because there is a entrance and a exit.

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The storage cabinets because they store the ingredients for the poison.

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The employees because they work to make the poison.

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A burner where we burn the extra ingredients.

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The solar panels are just like the mitochondria and the chloroplast.