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maybe use ime as z-axis try!

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Antón Velo. (2021). Excel to WHP-Exchange Bottle file converter tool (Version v1.0.0). Zenodo. http://doi.org/10.5281/zenodo.4595948

https://github.com/avelo/excel2whpexchange/issues.

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commented by Louisa G.

no more info

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https://www.emodnet-chemistry.eu/products/doi;jsessionid=7629F376C150437CC6502C621B72C241?0&doi=10.6092/ep6n-tp63

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Author(s)

Hellenic Centre for Marine Research, Hellenic National Oceanographic Data Centre (HCMR/HNODC)

Originator(s)

ARPA Emilia-Romagna, Struttura Oceanografica Daphne

Angers University, Laboratory of current and fossil bio-indicators, UMR CNRS 6112 LPG-BIAF

British Oceanographic Data Centre

CEA, Climate and Environmental Sciences Laboratory

CNR, Institute of Marine Sciences S.S. of Lerici (SP)

CNR, Istituto di Scienze Marine (Sezione di Venezia, ex IBM)

CNR, Istituto per l'Ambiente Marino Costiero (Sezione di Oristano)

CNR, Istituto per lo Studio della Dinamica delle Grandi Masse

CNR, National Research Council, Institute of Atmospheric Sciences and Climate, Rome

CNR, National Research Council, Institute of Marine Science, Ancona

CNR, National Research Council, Institute of Marine Science, Bologna

CNR, National Research Council, Institute of Marine Science, Lesina

CNR, National Research Council, Institute of Marine Science, Trieste

CNRS, COM, Physical and Biogeochemical Oceanography Laboratory (Toulon)

CNRS, Center of Oceanology of Marseille (COM) La-Seyne-Sur-Mer

CNRS, Laboratory of studies on Spatial Geophysics and Oceanography, UMR 5566

CNRS, Microbiology, Geochemistry and Marine Ecology Laboratory

COM, Physical and Biogeochemical Oceanography Laboratory (Endoume)

COM, Physical and Biogeochemical Oceanography Laboratory (LUMINY)

CSIC-CEAB, Centre for Advanced Studies of Blanes

CSIC-ICM, Institute of Marine Sciences

CSIC-UTM, Marine Technology Unit

Center for marine research, Rudjer Boskovic Institute

Commissione Permanente per lo Studio dell'Adriatico, Venezia

Cyprus Oceanography Center

DTU Aqua, National Institute of Aquatic Resources, Technical University of Denmark

Department of Fisheries and Marine Research, Division of Marine Biology and Ecology

ENEA Centro Ricerche Ambiente Marino, La Spezia

Federal Maritime and Hydrographic Agency

GEOSCIENCES MONTPELLIER, UMR 5243

German Hydrographic Institute

Hellenic Centre for Marine Research (HCMR)

Hellenic Centre for Marine Research, Institute of Oceanography

Hydrographic and oceanographic service of the navy

IEO, Murcia Oceanographic Centre

IEO, Balearic Islands Oceanographic Centre

IEO, La Coruna Oceanographic Centre

IEO, Malaga Oceanographic Centre

IEO, Spanish Oceanographic Institute

IFREMER Head Office

IFREMER, Biogeochimical end Ecotoxicological Resarch Unit

IFREMER, DEEP ENVIRONMENT LABORATORY

IFREMER, ENVIRONMENT RESOURCES LABORATORY PROVENCE AZUR CORSICA , LA SEYNE-SUR-MER

IFREMER, RBE Department, Biogeochimical end Ecotoxicological Resarch Unit (Toulon)

IFREMER, STATION DE SETE

IFREMER, Technologicals Research and Development

IRD, CENTRE OF ABIDJAN

ISPRA-Institute for Environmental Protection and Research

Ifremer, VIGIES (Information Valuation Service for Integrated Management and Monitoring)

Institut National des Sciences et Technologies de la Mer, INSTM

Institute of Biology of the Southern Seas, NAS of Ukraine

Institute of Marine Biology (IMBK)

Institute of Marine Sciences, Middle East Technical University

Institute of Oceanography and Fisheries

Israel Oceanographic and Limnological Research

Laboratory of Oceanography and Climate: Experiments and numerical Approaches, UMR 7159

Laboratory of Oceanography of Villefranche, UMR 7093

MUSEUM NATIONAL D'HISTOIRE NATURELLE, LABORATOIRE D'OCEANOGRAPHIE PHYSIQUE

Malta Centre for Fisheries Sciences

Marine Biology Laboratory of Trieste

Marine Institute

Mediterranean Institute of Oceanography, UMR 7294 UMR IRD 235, MARSEILLE

Moscow State University, Geography Department

Murmansk Hydrometeorological Administration of Roshydromet

National Institute of Biology, Marine Biology Station

OGS (Istituto Nazionale di Oceanografia e di Geofisica Sperimentale), Department of Biological Oceanography

OGS (Istituto Nazionale di Oceanografia e di Geofisica Sperimentale), Division of Oceanography

ORION

Oceanologic Observatory of Banyuls (University of Paris VI), OSU

Oceanological Observatory of Villefranche sur Mer

Odessa Branch of SOI (State Oceanographic Institute)

P.P.Shirshov Institute of Oceanology, RAS

Southampton Oceanography Centre

Stazione Zoologica Anton Dohrn of Naples

UIB, Baleares Islands University. Environmental Biology Department.

UNIVERSITE DE LA MEDITERRANNEE (U2), CENTRE D'OCEANOLOGIE DE MARSEILLE

UNIVERSITY OF PERPIGNAN, CEFREM

Ukrainian scientific center of Ecology of Sea

Universite de Toulon, Lab. De Sondages Electromagnetiques

University of Athens, Department of Chemistry, Division of Inorganic and Environmental Chemistry, Environmental and Marine Chemistry Group

University of Tuscia-Viterbo

V.I. Il'ichevs Pacific Oceanological Institute, Far Eastern Branch, Russian Academy of Sciences

Villefranche Sea Institute, FR 3761

Publisher

EMODnet Chemistry

DOI

10.6092/EP6N-TP63

Publication Year

2021

Temporal Extent (Data collection)

1911-08-17 to 2020-10-16

Keywords

Oceanographic geographical features; ; /Chemical Environment/Water Column; Water body ammonium; Water body nitrite; Water body dissolved inorganic nitrogen (DIN); Water body phosphate; Water body pH; Water body total alkalinity; Water body nitrate plus nitrite; ITS-90 water temperature; Water body chlorophyll-a; Water body silicate; Water body nitrate; Water body total phosphorus; Water body salinity; Water body dissolved oxygen saturation; Water body dissolved oxygen concentration; Water body total nitrogen; Mediterranean Sea; water body; Fertilisers; Chlorophyll; Dissolved gases; Silicates; Acidity; Vertical Profile; Timeseries; EMODnet Chemistry; Oceanography; Chemistry; European seas; MSFD

Resource Type

Dataset

Size

187722 CDI records

375.57 MB

Formats

application/zip

SeaDataNet ODV spreadsheet: text/tab-separated-values

SeaDataNet ODV collection

Abstract

EMODnet Chemistry aims to provide access to marine chemistry data sets and derived data products concerning eutrophication, acidity and contaminants. The chemicals chosen reflect importance to the Marine Strategy Framework Directive (MSFD). ITS-90 water temperature and Water body salinity variables have been also included (as-is) to complete the Eutrophication and Acidity data. If you use these variables for calculations, please refer to SeaDataNet for having the quality flags: https://www.seadatanet.org/Products/Aggregated-datasets . This aggregated dataset contains all unrestricted EMODnet Chemistry data on Eutrophication and Acidity (15 parameters with quality flag indicators), and covers the Mediterranean Sea with 187722 CDI records (180932 Vertical profiles and 6790 Time series). Vertical profiles temporal range is from 1911-08-17 to 2020-10-16. Time series temporal range is from 1974-06-04 to 2018-02-20. Data were aggregated and quality controlled by 'Hellenic Centre for Marine Research, Hellenic National Oceanographic Data Centre (HCMR/HNODC)' from Greece.
Regional datasets concerning eutrophication and acidity are automatically harvested and resulting collections are aggregated and quality controlled using ODV Software and following a common methodology for all Sea Regions ( https://doi.org/10.6092/9f75ad8a-ca32-4a72-bf69-167119b2cc12). When not present in original data, Water body nitrate plus nitrite was calculated by summing up the Nitrates and Nitrites. Same procedure was applied for Water body dissolved inorganic nitrogen (DIN) which was calculated by summing up the Nitrates, Nitrites and Ammonium.
Parameter names are based on P35, EMODnet Chemistry aggregated parameter names vocabulary, which is available at: https://www.bodc.ac.uk/resources/vocabularies/vocabulary_search/P35/.
Version 1.1, updated on 2022-02-08.
Detailed documentation is available at: https://dx.doi.org/10.6092/4e85717a-a2c9-454d-ba0d-30b89f742713
The aggregated dataset can be downloaded as ODV collection and spreadsheet, which is composed of metadata header followed by tab separated values. This spreadsheet can be imported to ODV Software for visualisation (More information can be found at: https://www.seadatanet.org/Software/ODV ).
The original datasets can be searched and downloaded from EMODnet Chemistry Download Service: https://emodnet-chemistry.maris.nl/search

Funding References

Aggregated data products are generated by EMODnet Chemistry under the support of DG MARE Call for Tenders EASME/EMFF/2016/006-lot4, EASME/2019/OP/0003-lot4.

Access Rights

Open Access

Creative Commons Attribution 4.0 International: https://creativecommons.org/licenses/by/4.0/

Aggregated datasets are public domain and freely available for all users, following the specified citation format. Free user registration is required.

How to cite

Hellenic Centre for Marine Research, Hellenic National Oceanographic Data Centre (HCMR/HNODC) (2021). Mediterranean Sea - Eutrophication and Acidity aggregated datasets 1911/2020 v2021. Aggregated data products are generated by EMODnet Chemistry under the support of DG MARE Call for Tenders EASME/EMFF/2016/006-lot4, EASME/2019/OP/0003-lot4.
https://doi.org/10.6092/EP6N-TP63

Data download

# data[].attributes.attachment_link.title
Mediterranean Sea - Eutrophication and Acidity aggregated datasets 1911/2020 v2021

# data[].attributes.attachment_link.description
Author(s) Hellenic Centre for Marine Research, Hellenic National Oceanographic Data Centre (HCMR/HNODC) Originator(s) ARPA Emilia-Romagna, Struttura Oceanografica Daphne Angers University, Laboratory of current and fossil bio-indicators, UMR CNRS 6112 LPG-BIAF British Oceanographic Data Centre CEA, Climate and Environmental Sciences Laboratory CNR, Institute of Marine Sciences S.S.

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Greek cruises compiled in JPI report ... Huertas/Padin

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Greek cruises compiled in JPI report ... Huertas/Padin

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| 1998 | March | 6 | MATER -3 | North & South Aegean | AT & CT       | Simultaneous determination with potentiometric method

| 1997  | September | 13 | MATER -2 | North & South Aegean | AT & CT         | Simultaneous determination with potentiometric method

| 1997 | March-April | 11 | MATER -1 | North & South Aegean | AT & CT       | Simultaneous determination with potentiometric method

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1. NCEI files:

Following GLODAP procedures, CARIMED cruises will only include a csv file including original data and metadata, and the cruise report if available. Therefore the MATLAB and README files won't be included in NCEI.

Check that metadata in NCEI and csv coincide (files contained here). Also check that the csv file stored in NCEI is the latest version. To be done by cruise PIs (Marta has sent them an email about this).

Do not update parameter headers following Jiang et al. (2022).

2. New cruise submission: Deadline for new submissions by the end of Feb.

3. OCADS website: To be created by Alex in Feb (tentative timing).

4. Ask for a tab in Glodap.info for CARIMED.

5. CARIMED's 2QC:

Do not use CANYON-MED or ESPER as 2QC tools since they are trained with unadjusted data.

Set 3 consecutive meetings to discuss 2QC results:

1st: Nico, Antón, Marta, and Maribel around mid-Feb.

2nd: Nico, Antón, Marta, Alex, Toste and Maribel to discuss 2QC results (around March).

3rd: Meeting with the PIs to explain 2QC adjustments.

6. ESSD manuscript:

All: check draft scheme and bullet points within.

Marta and Maribel to populate with text.

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Northern Adriatic Sea
ASCOP 3 30 apr 8 may 1983
pH potentiometric NBS

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to be confirmed by Soeren ?¿

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Described in Cantoni et al 2016
http://dx.doi.org/10.1016/j.margeo.2015.08.013

The biogeochemical properties of the southern Adriatic bottom waters were measured during the first leg of the cruise carried out by the
Italian R/V Minerva Uno (ODW 2012, March 24–April 2, 2012). The sampling strategy was based on the previous knowledge of the dense water
cascading process in the area (Turchetto et al., 2007; Rubino et al.,
2012), on a detailed bottom topography (Foglini et al., 2016–in this
issue) and on numerical ocean model ensamble forecasts.

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reproduce
_INI.mat
_INT.mat
expocode.mat
map

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Agenda for February's meeting (~30'-1h meeting)

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Agenda for February's meeting (~30'-1h meeting)

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1 Uploading original files to NCEI.

1a What to do with the cruises that are already in GLODAP?.. Meteor 2001 2011 and Otranto_5

1b Do we want/need to update bottle files according to https://www.frontiersin.org/articles/10.3389/fmars.2021.705638/full?

2 Deadline for new cruises' submissions (if any).

3 CARIMED will be created in NCEI /OCADS and also under the GLODAP.info blog? (Siv and Are may say something after we decide!)

4.. after CARIMED first release ... should it be maintained and updated in OCADS and GLODAP.info regularly even after the release of GLODAPv3?

5 Mar-Apr: 2-3 half-day meeting to discuss CARIMED's 2QC

Additional points (in case of time availability):
- Use CANYON-MED or ESPER for 2QC?
- Structure of ESSD paper (draft structure here).
- discussion about the minimum adjustment limits.

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- NCEI folder for CARIMED cruises are incomple
- please check here
https://docs.google.com/spreadsheets/d/1XTvvObH-Ftm0i9TEzAhuxMGla9hAuAzB/edit?usp=sharing&ouid=116501495920014713632&rtpof=true&sd=true
columns W X Y

- NCEI folders should contain only
expocode.CSV
reports (*doc or *pdf)

- all the former files are in " Marta's google drive " in the first column of the padlet or here
https://drive.google.com/drive/folders/1NDJFp_lyz437KLglRjzZ0AzSSJhs-s_e?usp=sharing

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https://cordis.europa.eu/project/id/265103/reporting
https://cordis.europa.eu/docs/results/265/265103/final1-project-final-report-lastdraft-3.pdf

Proxy-based reconstruction of surface water acidification and carbonate saturation of the Levant Sea during the Anthropocene

https://www.sciencedirect.com/science/article/abs/pii/S2213305416300881?via%3Dihub

An Initial Assessment of the Contribution of Fresh Submarine Ground Water Discharge to the Alkalinity Budget of the Mediterranean Sea

https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2020JC017085

Multivariate Sub-Regional Ocean Indicators in the Mediterranean Sea: From Event Detection to Climate Change Estimations

https://www.frontiersin.org/articles/10.3389/fmars.2021.610589/full#refer1

Dissolved oxygen variability in the Mediterranean Sea

https://www.sciencedirect.com/science/article/abs/pii/S0924796320300440?via%3Dihub

Solidoro C, Cossarini G, Lazzari P, Galli G, Bolzon G, Somot S and Salon S (2022) Modeling Carbon Budgets and Acidification in the Mediterranean Sea Ecosystem Under Contemporary and Future Climate. Front. Mar. Sci. 8:781522. doi: 10.3389/fmars.2021.781522

Cossarini, G., Feudale, L., Teruzzi, A., Bolzon, G., Coidessa, G., Solidoro, C., et al. (2021). High-resolution reanalysis of the Mediterranean Sea biogeochemistry (1999-2019). Front. Mar. Sci. 8:741486. doi: 10.3389/fmars.2021.741486

Biogeochemical Argo: The Test Case of the NAOS Mediterranean Array

https://www.frontiersin.org/articles/10.3389/fmars.2020.00120/full

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https://co2.iim.csic.es/seafile/d/35aa9ec3aa1b4e80a630/

(Password: carimed2020)

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https://carimed.geomar.de/
user... marta.alvarez@ieo.es

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https://www.ncei.noaa.gov/access/ocean-carbon-data-system/oceans/Coastal/Meteor_Med_Sea.html

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OCADS - R/V Meteor Mediterranean Cruises

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https://drive.google.com/drive/folders/1NDJFp_lyz437KLglRjzZ0AzSSJhs-s_e

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Get access to files anywhere through secure cloud storage and file backup for your photos, videos, files and more with Google Drive.